diff --git a/testing/project_setup/cpp_empty/1_setup.sh b/testing/project_setup/cpp_empty/1_setup.sh
new file mode 100644
index 00000000..99ec0093
--- /dev/null
+++ b/testing/project_setup/cpp_empty/1_setup.sh
@@ -0,0 +1,11 @@
+
+MY_PATH=`dirname "$0"`
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/cpp_empty/2_update.sh b/testing/project_setup/cpp_empty/2_update.sh
new file mode 100644
index 00000000..dd26df30
--- /dev/null
+++ b/testing/project_setup/cpp_empty/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/Bar.h
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/cpp_empty/3_teardown.sh b/testing/project_setup/cpp_empty/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/cpp_empty/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/cpp_empty/checklist.txt b/testing/project_setup/cpp_empty/checklist.txt
new file mode 100644
index 00000000..7de27dbb
--- /dev/null
+++ b/testing/project_setup/cpp_empty/checklist.txt
@@ -0,0 +1,35 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "C++" -> Empty C++ Source Group"
+* Click "Next"
+* Click "Next"
+* Add "./src" to "Files & Directories to Index"
+* Add "**/Foo.h" to "Excluded Files & Directories"
+* Click "Next"
+* Click "validate include directives"
+* Validate result: "All include directives are resolved"
+* Click "Next"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "2"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/cpp_empty/data/src/Bar.h b/testing/project_setup/cpp_empty/data/src/Bar.h
new file mode 100644
index 00000000..1cb93caf
--- /dev/null
+++ b/testing/project_setup/cpp_empty/data/src/Bar.h
@@ -0,0 +1,10 @@
+#ifndef FOO_H
+#define FOO_H
+
+#include "FooBar.h"
+
+class Bar : public FooBar
+{
+};
+
+#endif // FOO_H
diff --git a/testing/project_setup/cpp_empty/data/src/Foo.h b/testing/project_setup/cpp_empty/data/src/Foo.h
new file mode 100644
index 00000000..1ad18563
--- /dev/null
+++ b/testing/project_setup/cpp_empty/data/src/Foo.h
@@ -0,0 +1,10 @@
+#ifndef BAR_H
+#define BAR_H
+
+#include "FooBar.h"
+
+class Foo : public FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cpp_empty/data/src/FooBar.h b/testing/project_setup/cpp_empty/data/src/FooBar.h
new file mode 100644
index 00000000..0e9062d4
--- /dev/null
+++ b/testing/project_setup/cpp_empty/data/src/FooBar.h
@@ -0,0 +1,8 @@
+#ifndef FOO_BAR_H
+#define FOO_BAR_H
+
+class FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cpp_empty/data/src/main.cpp b/testing/project_setup/cpp_empty/data/src/main.cpp
new file mode 100644
index 00000000..333d36dc
--- /dev/null
+++ b/testing/project_setup/cpp_empty/data/src/main.cpp
@@ -0,0 +1,9 @@
+#include "Foo.h"
+#include "Bar.h"
+
+void test()
+{
+	Foo foo;
+	Bar bar;
+}
+
diff --git a/testing/project_setup/cxx_cbp/1_setup.sh b/testing/project_setup/cxx_cbp/1_setup.sh
new file mode 100644
index 00000000..9e28a1db
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/1_setup.sh
@@ -0,0 +1,17 @@
+
+MY_PATH=`dirname "$0"`
+
+MY_PATH="${MY_PATH//\\//}"
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+WORKING_COPY_SRC_PATH=$WORKING_COPY_PATH/src
+CBD_PATH=$WORKING_COPY_PATH/Test.cbp
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+sed -i "s|<source_path>|${WORKING_COPY_SRC_PATH}|g" ${CBD_PATH}
+
+echo "Setup Complete"
diff --git a/testing/project_setup/cxx_cbp/2_update.sh b/testing/project_setup/cxx_cbp/2_update.sh
new file mode 100644
index 00000000..d0b522ee
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/include/Bar.h
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/cxx_cbp/3_teardown.sh b/testing/project_setup/cxx_cbp/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/cxx_cbp/checklist.txt b/testing/project_setup/cxx_cbp/checklist.txt
new file mode 100644
index 00000000..3081744d
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/checklist.txt
@@ -0,0 +1,34 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "C++" -> C/C++ from Compilation Database"
+* Click "Next"
+* Pick "./working_copy/Test.cbp" at "Compilation Database"
+* Click "show source files" button
+* Validate "Source Files" list contains "src/main.cpp"
+* Click "OK"
+* Validate "Header Files & Directories to Index" contains "src" entry
+* Add "**/Foo.h" to "Excluded Files & Directories"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "2"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/cxx_cbp/data/Test.cbp b/testing/project_setup/cxx_cbp/data/Test.cbp
new file mode 100644
index 00000000..c2f4f98b
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/data/Test.cbp
@@ -0,0 +1,80 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<CodeBlocks_project_file>
+	<FileVersion major="1" minor="6"/>
+	<Project>
+		<Option title="Test"/>
+		<Option makefile_is_custom="1"/>
+		<Option compiler="msvc8"/>
+		<Option virtualFolders="CMake Files\;"/>
+		<Build>
+			<Target title="all">
+				<Option working_dir="<source_path>"/>
+				<Option type="4"/>
+				<MakeCommands>
+					<Build command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 all"/>
+					<CompileFile command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 &quot;$file&quot;"/>
+					<Clean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+					<DistClean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+				</MakeCommands>
+			</Target>
+			<Target title="Test">
+				<Option output="<source_path>/Test.exe" prefix_auto="0" extension_auto="0"/>
+				<Option working_dir="<source_path>"/>
+				<Option object_output="./"/>
+				<Option type="1"/>
+				<Option compiler="msvc8"/>
+				<Compiler>
+					<Add directory="<source_path>/include"/>
+				</Compiler>
+				<MakeCommands>
+					<Build command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 Test"/>
+					<CompileFile command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 &quot;$file&quot;"/>
+					<Clean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+					<DistClean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+				</MakeCommands>
+			</Target>
+			<Target title="Test/fast">
+				<Option output="<source_path>/Test.exe" prefix_auto="0" extension_auto="0"/>
+				<Option working_dir="<source_path>"/>
+				<Option object_output="./"/>
+				<Option type="1"/>
+				<Option compiler="msvc8"/>
+				<Compiler>
+					<Add directory="<source_path>/include"/>
+				</Compiler>
+				<MakeCommands>
+					<Build command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 Test/fast"/>
+					<CompileFile command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 &quot;$file&quot;"/>
+					<Clean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+					<DistClean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+				</MakeCommands>
+			</Target>
+			<Target title="edit_cache">
+				<Option working_dir="<source_path>"/>
+				<Option type="4"/>
+				<MakeCommands>
+					<Build command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 edit_cache"/>
+					<CompileFile command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 &quot;$file&quot;"/>
+					<Clean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+					<DistClean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+				</MakeCommands>
+			</Target>
+			<Target title="rebuild_cache">
+				<Option working_dir="<source_path>"/>
+				<Option type="4"/>
+				<MakeCommands>
+					<Build command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 rebuild_cache"/>
+					<CompileFile command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 &quot;$file&quot;"/>
+					<Clean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+					<DistClean command="nmake /NOLOGO /f <source_path>\Makefile VERBOSE=1 clean"/>
+				</MakeCommands>
+			</Target>
+		</Build>
+		<Unit filename="<source_path>/main.cpp">
+			<Option target="Test"/>
+		</Unit>
+		<Unit filename="<source_path>/CMakeLists.txt">
+			<Option virtualFolder="CMake Files\"/>
+		</Unit>
+	</Project>
+</CodeBlocks_project_file>
diff --git a/testing/project_setup/cxx_cbp/data/src/include/Bar.h b/testing/project_setup/cxx_cbp/data/src/include/Bar.h
new file mode 100644
index 00000000..1cb93caf
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/data/src/include/Bar.h
@@ -0,0 +1,10 @@
+#ifndef FOO_H
+#define FOO_H
+
+#include "FooBar.h"
+
+class Bar : public FooBar
+{
+};
+
+#endif // FOO_H
diff --git a/testing/project_setup/cxx_cbp/data/src/include/Foo.h b/testing/project_setup/cxx_cbp/data/src/include/Foo.h
new file mode 100644
index 00000000..1ad18563
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/data/src/include/Foo.h
@@ -0,0 +1,10 @@
+#ifndef BAR_H
+#define BAR_H
+
+#include "FooBar.h"
+
+class Foo : public FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_cbp/data/src/include/FooBar.h b/testing/project_setup/cxx_cbp/data/src/include/FooBar.h
new file mode 100644
index 00000000..0e9062d4
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/data/src/include/FooBar.h
@@ -0,0 +1,8 @@
+#ifndef FOO_BAR_H
+#define FOO_BAR_H
+
+class FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_cbp/data/src/main.cpp b/testing/project_setup/cxx_cbp/data/src/main.cpp
new file mode 100644
index 00000000..333d36dc
--- /dev/null
+++ b/testing/project_setup/cxx_cbp/data/src/main.cpp
@@ -0,0 +1,9 @@
+#include "Foo.h"
+#include "Bar.h"
+
+void test()
+{
+	Foo foo;
+	Bar bar;
+}
+
diff --git a/testing/project_setup/cxx_cdb/1_setup.sh b/testing/project_setup/cxx_cdb/1_setup.sh
new file mode 100644
index 00000000..9609822d
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/1_setup.sh
@@ -0,0 +1,23 @@
+
+MY_PATH=`dirname "$0"`
+
+MY_PATH="${MY_PATH//\\//}"
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+WORKING_COPY_SRC_PATH=$WORKING_COPY_PATH/src
+CDB_PATH=$WORKING_COPY_PATH/compile_commands.json
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "[" >> $CDB_PATH
+echo "  {" >> $CDB_PATH
+echo "    \"directory\": \"${WORKING_COPY_PATH}\"," >> $CDB_PATH
+echo "    \"command\": \"clang-tool -fms-extensions -fms-compatibility -fms-compatibility-version=19 -isystem \\\"${WORKING_COPY_SRC_PATH}/include\\\"  -D _DEBUG  -D _MT  -D _DLL  -D WIN32  -D _WINDOWS  -D BUILD_TYPE=\\\"\\\"  -D QT_WIDGETS_LIB  -D QT_GUI_LIB  -D QT_CORE_LIB  -D QT_NETWORK_LIB  -D QT_WINEXTRAS_LIB  -D QT_SVG_LIB  -D CMAKE_INTDIR=\\\"Debug\\\"  -D _MBCS -std=c++14 \\\"${WORKING_COPY_SRC_PATH}/main.cpp\\\"\"" >> $CDB_PATH
+echo "    \"file\": \"${WORKING_COPY_SRC_PATH}/main.cpp\"" >> $CDB_PATH
+echo "  }" >> $CDB_PATH
+echo "]" >> $CDB_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/cxx_cdb/2_update.sh b/testing/project_setup/cxx_cdb/2_update.sh
new file mode 100644
index 00000000..d0b522ee
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/include/Bar.h
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/cxx_cdb/3_teardown.sh b/testing/project_setup/cxx_cdb/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/cxx_cdb/checklist.txt b/testing/project_setup/cxx_cdb/checklist.txt
new file mode 100644
index 00000000..96e8533c
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/checklist.txt
@@ -0,0 +1,34 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "C++" -> C/C++ from Compilation Database"
+* Click "Next"
+* Pick "./working_copy/compile_commands.json" at "Compilation Database"
+* Click "show source files" button
+* Validate "Source Files" list contains "src/main.cpp"
+* Click "OK"
+* Validate "Header Files & Directories to Index" contains "src" entry
+* Add "**/Foo.h" to "Excluded Files & Directories"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "2"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/cxx_cdb/data/src/include/Bar.h b/testing/project_setup/cxx_cdb/data/src/include/Bar.h
new file mode 100644
index 00000000..1cb93caf
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/data/src/include/Bar.h
@@ -0,0 +1,10 @@
+#ifndef FOO_H
+#define FOO_H
+
+#include "FooBar.h"
+
+class Bar : public FooBar
+{
+};
+
+#endif // FOO_H
diff --git a/testing/project_setup/cxx_cdb/data/src/include/Foo.h b/testing/project_setup/cxx_cdb/data/src/include/Foo.h
new file mode 100644
index 00000000..1ad18563
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/data/src/include/Foo.h
@@ -0,0 +1,10 @@
+#ifndef BAR_H
+#define BAR_H
+
+#include "FooBar.h"
+
+class Foo : public FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_cdb/data/src/include/FooBar.h b/testing/project_setup/cxx_cdb/data/src/include/FooBar.h
new file mode 100644
index 00000000..0e9062d4
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/data/src/include/FooBar.h
@@ -0,0 +1,8 @@
+#ifndef FOO_BAR_H
+#define FOO_BAR_H
+
+class FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_cdb/data/src/main.cpp b/testing/project_setup/cxx_cdb/data/src/main.cpp
new file mode 100644
index 00000000..333d36dc
--- /dev/null
+++ b/testing/project_setup/cxx_cdb/data/src/main.cpp
@@ -0,0 +1,9 @@
+#include "Foo.h"
+#include "Bar.h"
+
+void test()
+{
+	Foo foo;
+	Bar bar;
+}
+
diff --git a/testing/project_setup/cxx_sonargraph_manual/1_setup.sh b/testing/project_setup/cxx_sonargraph_manual/1_setup.sh
new file mode 100644
index 00000000..520e6142
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/1_setup.sh
@@ -0,0 +1,13 @@
+
+MY_PATH=`dirname "$0"`
+
+MY_PATH="${MY_PATH//\\//}"
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/cxx_sonargraph_manual/2_update.sh b/testing/project_setup/cxx_sonargraph_manual/2_update.sh
new file mode 100644
index 00000000..dd26df30
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/Bar.h
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/cxx_sonargraph_manual/3_teardown.sh b/testing/project_setup/cxx_sonargraph_manual/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/cxx_sonargraph_manual/checklist.txt b/testing/project_setup/cxx_sonargraph_manual/checklist.txt
new file mode 100644
index 00000000..9642980b
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/checklist.txt
@@ -0,0 +1,33 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "C++" -> C/C++ from Sonargraph"
+* Click "Next"
+* Pick "./working_copy/Test.sonargraph/system.sonargraph" at "Compilation Database"
+* Click "show source files" button
+* Validate "Source Files" list contains "src/main.cpp"
+* Click "OK"
+* Validate "Header Files & Directories to Index" contains "src" entry
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "2"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/cxx_sonargraph_manual/data/Test.sonargraph/system.sonargraph b/testing/project_setup/cxx_sonargraph_manual/data/Test.sonargraph/system.sonargraph
new file mode 100644
index 00000000..82a05238
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/data/Test.sonargraph/system.sonargraph
@@ -0,0 +1,8 @@
+<?xml version="1.0" ?>
+<ns2:softwareSystem xmlns:ns2="http://www.hello2morrow.com/sonargraph/core" id="0c1ca5dfc52cd6e30960e06c4d5cb96a" version="9.8.1.519">
+    <description></description>
+    <module xmlns:ns4="http://www.hello2morrow.com/sonargraph/languageprovider/cplusplus" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="ns4:xsdCppManualModule" name="Test" id="24d0b2632bc424febb83b42d77e8eae5" language="CPlusPlus">
+        <description></description>
+        <rootPath name="."></rootPath>
+    </module>
+</ns2:softwareSystem>
\ No newline at end of file
diff --git a/testing/project_setup/cxx_sonargraph_manual/data/src/Bar.h b/testing/project_setup/cxx_sonargraph_manual/data/src/Bar.h
new file mode 100644
index 00000000..1cb93caf
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/data/src/Bar.h
@@ -0,0 +1,10 @@
+#ifndef FOO_H
+#define FOO_H
+
+#include "FooBar.h"
+
+class Bar : public FooBar
+{
+};
+
+#endif // FOO_H
diff --git a/testing/project_setup/cxx_sonargraph_manual/data/src/Foo.h b/testing/project_setup/cxx_sonargraph_manual/data/src/Foo.h
new file mode 100644
index 00000000..1ad18563
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/data/src/Foo.h
@@ -0,0 +1,10 @@
+#ifndef BAR_H
+#define BAR_H
+
+#include "FooBar.h"
+
+class Foo : public FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_sonargraph_manual/data/src/FooBar.h b/testing/project_setup/cxx_sonargraph_manual/data/src/FooBar.h
new file mode 100644
index 00000000..0e9062d4
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/data/src/FooBar.h
@@ -0,0 +1,8 @@
+#ifndef FOO_BAR_H
+#define FOO_BAR_H
+
+class FooBar
+{
+};
+
+#endif // FOO_BAR_H
diff --git a/testing/project_setup/cxx_sonargraph_manual/data/src/main.cpp b/testing/project_setup/cxx_sonargraph_manual/data/src/main.cpp
new file mode 100644
index 00000000..333d36dc
--- /dev/null
+++ b/testing/project_setup/cxx_sonargraph_manual/data/src/main.cpp
@@ -0,0 +1,9 @@
+#include "Foo.h"
+#include "Bar.h"
+
+void test()
+{
+	Foo foo;
+	Bar bar;
+}
+
diff --git a/testing/project_setup/java_empty/1_setup.sh b/testing/project_setup/java_empty/1_setup.sh
new file mode 100644
index 00000000..99ec0093
--- /dev/null
+++ b/testing/project_setup/java_empty/1_setup.sh
@@ -0,0 +1,11 @@
+
+MY_PATH=`dirname "$0"`
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/java_empty/2_update.sh b/testing/project_setup/java_empty/2_update.sh
new file mode 100644
index 00000000..f6c9fed9
--- /dev/null
+++ b/testing/project_setup/java_empty/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/foo/Bar.java
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/java_empty/3_teardown.sh b/testing/project_setup/java_empty/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/java_empty/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/java_empty/checklist.txt b/testing/project_setup/java_empty/checklist.txt
new file mode 100644
index 00000000..6ee7d315
--- /dev/null
+++ b/testing/project_setup/java_empty/checklist.txt
@@ -0,0 +1,32 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "Java" -> Empty Java Source Group"
+* Click "Next"
+* Click "Next"
+* Add "./src" to "Files & Directories to Index"
+* Add "**/Foo.java" to "Excluded Files & Directories"
+* Click "Next"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "1"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/java_empty/data/src/foo/Bar.java b/testing/project_setup/java_empty/data/src/foo/Bar.java
new file mode 100644
index 00000000..3f83f81a
--- /dev/null
+++ b/testing/project_setup/java_empty/data/src/foo/Bar.java
@@ -0,0 +1,5 @@
+package foo;
+
+class Bar implements FooBar
+{
+}
diff --git a/testing/project_setup/java_empty/data/src/foo/Foo.java b/testing/project_setup/java_empty/data/src/foo/Foo.java
new file mode 100644
index 00000000..c1ad3580
--- /dev/null
+++ b/testing/project_setup/java_empty/data/src/foo/Foo.java
@@ -0,0 +1,5 @@
+package foo;
+
+class Foo implements FooBar
+{
+}
diff --git a/testing/project_setup/java_empty/data/src/foo/FooBar.java b/testing/project_setup/java_empty/data/src/foo/FooBar.java
new file mode 100644
index 00000000..3493102a
--- /dev/null
+++ b/testing/project_setup/java_empty/data/src/foo/FooBar.java
@@ -0,0 +1,5 @@
+package foo;
+
+public interface FooBar
+{
+}
diff --git a/testing/project_setup/java_empty/data/src/foo/Main.java b/testing/project_setup/java_empty/data/src/foo/Main.java
new file mode 100644
index 00000000..937ae676
--- /dev/null
+++ b/testing/project_setup/java_empty/data/src/foo/Main.java
@@ -0,0 +1,8 @@
+package foo;
+
+public class Main
+{
+	public Foo m_foo;
+	public Bar m_bar;
+}
+
diff --git a/testing/project_setup/java_gradle/1_setup.sh b/testing/project_setup/java_gradle/1_setup.sh
new file mode 100644
index 00000000..99ec0093
--- /dev/null
+++ b/testing/project_setup/java_gradle/1_setup.sh
@@ -0,0 +1,11 @@
+
+MY_PATH=`dirname "$0"`
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/java_gradle/2_update.sh b/testing/project_setup/java_gradle/2_update.sh
new file mode 100644
index 00000000..ad6042fd
--- /dev/null
+++ b/testing/project_setup/java_gradle/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/src/main/java/hello/Greeter.java
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/java_gradle/3_teardown.sh b/testing/project_setup/java_gradle/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/java_gradle/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/java_gradle/checklist.txt b/testing/project_setup/java_gradle/checklist.txt
new file mode 100644
index 00000000..58f1936d
--- /dev/null
+++ b/testing/project_setup/java_gradle/checklist.txt
@@ -0,0 +1,39 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "Java" -> Java Source Group from Gradle"
+* Click "Next"
+* Select "./working_copy/build.gradle" at "Gradle Project File"
+* Click "show source files"
+* Validate 2 files are listed
+* Click "OK"
+* Check "Sould Index Tests"
+* Click "show source files"
+* Validate 3 files are listed
+* Click "OK"
+* Click "Next"
+* Add "**/HelloWorld.java" to "Excluded Files & Directories"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Validate 2 files are listed for indexing
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "1"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/java_gradle/data/build.gradle b/testing/project_setup/java_gradle/data/build.gradle
new file mode 100644
index 00000000..d3c39e83
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/build.gradle
@@ -0,0 +1,31 @@
+apply plugin: 'java'
+apply plugin: 'eclipse'
+apply plugin: 'application'
+
+mainClassName = 'hello.HelloWorld'
+
+// tag::repositories[]
+repositories { 
+    mavenCentral() 
+}
+// end::repositories[]
+
+// tag::jar[]
+jar {
+    baseName = 'gs-gradle'
+    version =  '0.1.0'
+}
+// end::jar[]
+
+// tag::dependencies[]
+sourceCompatibility = 1.8
+targetCompatibility = 1.8
+
+dependencies {
+    compile "joda-time:joda-time:2.2"
+    testCompile "junit:junit:4.12"
+}
+// end::dependencies[]
+
+// tag::wrapper[]
+// end::wrapper[]
diff --git a/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.jar b/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.jar
new file mode 100644
index 00000000..ca78035e
Binary files /dev/null and b/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.jar differ
diff --git a/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.properties b/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.properties
new file mode 100644
index 00000000..7adc929b
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/gradle/wrapper/gradle-wrapper.properties
@@ -0,0 +1,6 @@
+#Thu Mar 01 09:01:25 CST 2018
+distributionBase=GRADLE_USER_HOME
+distributionPath=wrapper/dists
+zipStoreBase=GRADLE_USER_HOME
+zipStorePath=wrapper/dists
+distributionUrl=https\://services.gradle.org/distributions/gradle-4.6-bin.zip
diff --git a/testing/project_setup/java_gradle/data/gradlew b/testing/project_setup/java_gradle/data/gradlew
new file mode 100644
index 00000000..27309d92
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/gradlew
@@ -0,0 +1,164 @@
+#!/usr/bin/env bash
+
+##############################################################################
+##
+##  Gradle start up script for UN*X
+##
+##############################################################################
+
+# Attempt to set APP_HOME
+# Resolve links: $0 may be a link
+PRG="$0"
+# Need this for relative symlinks.
+while [ -h "$PRG" ] ; do
+    ls=`ls -ld "$PRG"`
+    link=`expr "$ls" : '.*-> \(.*\)$'`
+    if expr "$link" : '/.*' > /dev/null; then
+        PRG="$link"
+    else
+        PRG=`dirname "$PRG"`"/$link"
+    fi
+done
+SAVED="`pwd`"
+cd "`dirname \"$PRG\"`/" >/dev/null
+APP_HOME="`pwd -P`"
+cd "$SAVED" >/dev/null
+
+APP_NAME="Gradle"
+APP_BASE_NAME=`basename "$0"`
+
+# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+DEFAULT_JVM_OPTS=""
+
+# Use the maximum available, or set MAX_FD != -1 to use that value.
+MAX_FD="maximum"
+
+warn ( ) {
+    echo "$*"
+}
+
+die ( ) {
+    echo
+    echo "$*"
+    echo
+    exit 1
+}
+
+# OS specific support (must be 'true' or 'false').
+cygwin=false
+msys=false
+darwin=false
+nonstop=false
+case "`uname`" in
+  CYGWIN* )
+    cygwin=true
+    ;;
+  Darwin* )
+    darwin=true
+    ;;
+  MINGW* )
+    msys=true
+    ;;
+  NONSTOP* )
+    nonstop=true
+    ;;
+esac
+
+CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
+
+# Determine the Java command to use to start the JVM.
+if [ -n "$JAVA_HOME" ] ; then
+    if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
+        # IBM's JDK on AIX uses strange locations for the executables
+        JAVACMD="$JAVA_HOME/jre/sh/java"
+    else
+        JAVACMD="$JAVA_HOME/bin/java"
+    fi
+    if [ ! -x "$JAVACMD" ] ; then
+        die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+    fi
+else
+    JAVACMD="java"
+    which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+fi
+
+# Increase the maximum file descriptors if we can.
+if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
+    MAX_FD_LIMIT=`ulimit -H -n`
+    if [ $? -eq 0 ] ; then
+        if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
+            MAX_FD="$MAX_FD_LIMIT"
+        fi
+        ulimit -n $MAX_FD
+        if [ $? -ne 0 ] ; then
+            warn "Could not set maximum file descriptor limit: $MAX_FD"
+        fi
+    else
+        warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
+    fi
+fi
+
+# For Darwin, add options to specify how the application appears in the dock
+if $darwin; then
+    GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
+fi
+
+# For Cygwin, switch paths to Windows format before running java
+if $cygwin ; then
+    APP_HOME=`cygpath --path --mixed "$APP_HOME"`
+    CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
+    JAVACMD=`cygpath --unix "$JAVACMD"`
+
+    # We build the pattern for arguments to be converted via cygpath
+    ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
+    SEP=""
+    for dir in $ROOTDIRSRAW ; do
+        ROOTDIRS="$ROOTDIRS$SEP$dir"
+        SEP="|"
+    done
+    OURCYGPATTERN="(^($ROOTDIRS))"
+    # Add a user-defined pattern to the cygpath arguments
+    if [ "$GRADLE_CYGPATTERN" != "" ] ; then
+        OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
+    fi
+    # Now convert the arguments - kludge to limit ourselves to /bin/sh
+    i=0
+    for arg in "$@" ; do
+        CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
+        CHECK2=`echo "$arg"|egrep -c "^-"`                                 ### Determine if an option
+
+        if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then                    ### Added a condition
+            eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
+        else
+            eval `echo args$i`="\"$arg\""
+        fi
+        i=$((i+1))
+    done
+    case $i in
+        (0) set -- ;;
+        (1) set -- "$args0" ;;
+        (2) set -- "$args0" "$args1" ;;
+        (3) set -- "$args0" "$args1" "$args2" ;;
+        (4) set -- "$args0" "$args1" "$args2" "$args3" ;;
+        (5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
+        (6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
+        (7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
+        (8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
+        (9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
+    esac
+fi
+
+# Split up the JVM_OPTS And GRADLE_OPTS values into an array, following the shell quoting and substitution rules
+function splitJvmOpts() {
+    JVM_OPTS=("$@")
+}
+eval splitJvmOpts $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS
+JVM_OPTS[${#JVM_OPTS[*]}]="-Dorg.gradle.appname=$APP_BASE_NAME"
+
+exec "$JAVACMD" "${JVM_OPTS[@]}" -classpath "$CLASSPATH" org.gradle.wrapper.GradleWrapperMain "$@"
diff --git a/testing/project_setup/java_gradle/data/gradlew.bat b/testing/project_setup/java_gradle/data/gradlew.bat
new file mode 100644
index 00000000..832fdb60
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/gradlew.bat
@@ -0,0 +1,90 @@
+@if "%DEBUG%" == "" @echo off
+@rem ##########################################################################
+@rem
+@rem  Gradle startup script for Windows
+@rem
+@rem ##########################################################################
+
+@rem Set local scope for the variables with windows NT shell
+if "%OS%"=="Windows_NT" setlocal
+
+set DIRNAME=%~dp0
+if "%DIRNAME%" == "" set DIRNAME=.
+set APP_BASE_NAME=%~n0
+set APP_HOME=%DIRNAME%
+
+@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+set DEFAULT_JVM_OPTS=
+
+@rem Find java.exe
+if defined JAVA_HOME goto findJavaFromJavaHome
+
+set JAVA_EXE=java.exe
+%JAVA_EXE% -version >NUL 2>&1
+if "%ERRORLEVEL%" == "0" goto init
+
+echo.
+echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:findJavaFromJavaHome
+set JAVA_HOME=%JAVA_HOME:"=%
+set JAVA_EXE=%JAVA_HOME%/bin/java.exe
+
+if exist "%JAVA_EXE%" goto init
+
+echo.
+echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:init
+@rem Get command-line arguments, handling Windows variants
+
+if not "%OS%" == "Windows_NT" goto win9xME_args
+if "%@eval[2+2]" == "4" goto 4NT_args
+
+:win9xME_args
+@rem Slurp the command line arguments.
+set CMD_LINE_ARGS=
+set _SKIP=2
+
+:win9xME_args_slurp
+if "x%~1" == "x" goto execute
+
+set CMD_LINE_ARGS=%*
+goto execute
+
+:4NT_args
+@rem Get arguments from the 4NT Shell from JP Software
+set CMD_LINE_ARGS=%$
+
+:execute
+@rem Setup the command line
+
+set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
+
+@rem Execute Gradle
+"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
+
+:end
+@rem End local scope for the variables with windows NT shell
+if "%ERRORLEVEL%"=="0" goto mainEnd
+
+:fail
+rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
+rem the _cmd.exe /c_ return code!
+if  not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
+exit /b 1
+
+:mainEnd
+if "%OS%"=="Windows_NT" endlocal
+
+:omega
diff --git a/testing/project_setup/java_gradle/data/src/main/java/hello/Greeter.java b/testing/project_setup/java_gradle/data/src/main/java/hello/Greeter.java
new file mode 100644
index 00000000..a81d7134
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/src/main/java/hello/Greeter.java
@@ -0,0 +1,7 @@
+package hello;
+
+public class Greeter {
+  public String sayHello() {
+    return "Hello world!";
+  }
+}
\ No newline at end of file
diff --git a/testing/project_setup/java_gradle/data/src/main/java/hello/HelloWorld.java b/testing/project_setup/java_gradle/data/src/main/java/hello/HelloWorld.java
new file mode 100644
index 00000000..7df44300
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/src/main/java/hello/HelloWorld.java
@@ -0,0 +1,13 @@
+package hello;
+
+import org.joda.time.LocalTime;
+
+public class HelloWorld {
+  public static void main(String[] args) {
+    LocalTime currentTime = new LocalTime();
+    System.out.println("The current local time is: " + currentTime);
+
+    Greeter greeter = new Greeter();
+    System.out.println(greeter.sayHello());
+  }
+}
\ No newline at end of file
diff --git a/testing/project_setup/java_gradle/data/src/test/java/hello/HelloWorldTests.java b/testing/project_setup/java_gradle/data/src/test/java/hello/HelloWorldTests.java
new file mode 100644
index 00000000..c27b475f
--- /dev/null
+++ b/testing/project_setup/java_gradle/data/src/test/java/hello/HelloWorldTests.java
@@ -0,0 +1,40 @@
+package hello;
+
+import java.io.ByteArrayOutputStream;
+import java.io.PrintStream;
+import java.nio.charset.StandardCharsets;
+
+import org.junit.Before;
+import org.junit.Test;
+
+import static org.hamcrest.CoreMatchers.containsString;
+import static org.junit.Assert.assertThat;
+
+public class HelloWorldTests {
+
+    private ByteArrayOutputStream baos = new ByteArrayOutputStream();
+    private PrintStream ps = new PrintStream(baos);
+
+    @Before
+    public void setup() {
+        System.setOut(ps);
+    }
+
+    @Test
+    public void shouldPrintTimeToConsole() {
+        HelloWorld.main(new String[] { });
+
+        assertThat(output(), containsString("The current local time is"));
+    }
+
+    @Test
+    public void shouldPrintHelloWorldToConsole() {
+        HelloWorld.main(new String[] { });
+
+        assertThat(output(), containsString("Hello world!"));
+    }
+
+    private String output() {
+        return new String(baos.toByteArray(), StandardCharsets.UTF_8);
+    }
+}
diff --git a/testing/project_setup/java_maven/1_setup.sh b/testing/project_setup/java_maven/1_setup.sh
new file mode 100644
index 00000000..99ec0093
--- /dev/null
+++ b/testing/project_setup/java_maven/1_setup.sh
@@ -0,0 +1,11 @@
+
+MY_PATH=`dirname "$0"`
+
+SRC_PATH=$MY_PATH/data
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+mkdir -p $WORKING_COPY_PATH
+
+cp -ar $SRC_PATH/. $WORKING_COPY_PATH
+
+echo "Setup Complete"
diff --git a/testing/project_setup/java_maven/2_update.sh b/testing/project_setup/java_maven/2_update.sh
new file mode 100644
index 00000000..cea46747
--- /dev/null
+++ b/testing/project_setup/java_maven/2_update.sh
@@ -0,0 +1,9 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+echo "" >> $WORKING_COPY_PATH/my-app/src/main/java/com/mycompany/app/Bar.java
+
+echo "Update Complete"
+
diff --git a/testing/project_setup/java_maven/3_teardown.sh b/testing/project_setup/java_maven/3_teardown.sh
new file mode 100644
index 00000000..1bc80c4b
--- /dev/null
+++ b/testing/project_setup/java_maven/3_teardown.sh
@@ -0,0 +1,8 @@
+
+MY_PATH=`dirname "$0"`
+
+WORKING_COPY_PATH=$MY_PATH/working_copy
+
+rm -rf $WORKING_COPY_PATH
+
+echo "Teardown Complete"
diff --git a/testing/project_setup/java_maven/checklist.txt b/testing/project_setup/java_maven/checklist.txt
new file mode 100644
index 00000000..4180ec9a
--- /dev/null
+++ b/testing/project_setup/java_maven/checklist.txt
@@ -0,0 +1,39 @@
+* Run "1_setup.sh"
+* Start up Sourcetrail
+* Click "New Project"
+* Enter a project name
+* Set "./working_copy" as project location
+* Click "Add Source Group"
+* Select "Java" -> Java Source Group from Maven"
+* Click "Next"
+* Select "./working_copy/my-app/pom.xml" at "Maven Project File"
+* Click "show source files"
+* Validate 4 files are listed
+* Click "OK"
+* Check "Sould Index Tests"
+* Click "show source files"
+* Validate 5 files are listed
+* Click "OK"
+* Click "Next"
+* Add "**/Foo.java" to "Excluded Files & Directories"
+* Click "Next"
+* Click "Create"
+* Validate "All files" is the only option selectable
+* Validate 4 files are listed for indexing
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Press "Refresh" button
+* Validate "Updated files" is selected
+* Validate "source files to index" shows "0"
+* Click "Cancel"
+* Run "2_update.sh"
+* Press "Refresh" button
+* Validate "Files to clear" shows "1"
+* Validate "source files to index" shows "1"
+* Click "Start"
+* Validate Project indexed without error
+* Click "OK"
+* Close Sourcetrail
+* Run "3_teardown.sh"
+ 
\ No newline at end of file
diff --git a/testing/project_setup/java_maven/data/my-app/pom.xml b/testing/project_setup/java_maven/data/my-app/pom.xml
new file mode 100644
index 00000000..88b3fe28
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/pom.xml
@@ -0,0 +1,18 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+  <modelVersion>4.0.0</modelVersion>
+  <groupId>com.mycompany.app</groupId>
+  <artifactId>my-app</artifactId>
+  <packaging>jar</packaging>
+  <version>1.0-SNAPSHOT</version>
+  <name>my-app</name>
+  <url>http://maven.apache.org</url>
+  <dependencies>
+    <dependency>
+      <groupId>junit</groupId>
+      <artifactId>junit</artifactId>
+      <version>3.8.1</version>
+      <scope>test</scope>
+    </dependency>
+  </dependencies>
+</project>
diff --git a/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Bar.java b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Bar.java
new file mode 100644
index 00000000..93875ffd
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Bar.java
@@ -0,0 +1,5 @@
+package com.mycompany.app;
+
+class Bar implements FooBar
+{
+}
diff --git a/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Foo.java b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Foo.java
new file mode 100644
index 00000000..36136ccc
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Foo.java
@@ -0,0 +1,5 @@
+package com.mycompany.app;
+
+class Foo implements FooBar
+{
+}
diff --git a/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/FooBar.java b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/FooBar.java
new file mode 100644
index 00000000..fafc03c1
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/FooBar.java
@@ -0,0 +1,5 @@
+package com.mycompany.app;
+
+public interface FooBar
+{
+}
diff --git a/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Main.java b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Main.java
new file mode 100644
index 00000000..d97a5990
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/src/main/java/com/mycompany/app/Main.java
@@ -0,0 +1,13 @@
+package com.mycompany.app;
+
+public class Main
+{
+	public Foo m_foo;
+	public Bar m_bar;
+	
+	public static void main( String[] args )
+    {
+        System.out.println( "Hello World!" );
+    }
+}
+
diff --git a/testing/project_setup/java_maven/data/my-app/src/test/java/com/mycompany/app/AppTest.java b/testing/project_setup/java_maven/data/my-app/src/test/java/com/mycompany/app/AppTest.java
new file mode 100644
index 00000000..33559900
--- /dev/null
+++ b/testing/project_setup/java_maven/data/my-app/src/test/java/com/mycompany/app/AppTest.java
@@ -0,0 +1,38 @@
+package com.mycompany.app;
+
+import junit.framework.Test;
+import junit.framework.TestCase;
+import junit.framework.TestSuite;
+
+/**
+ * Unit test for simple App.
+ */
+public class AppTest 
+    extends TestCase
+{
+    /**
+     * Create the test case
+     *
+     * @param testName name of the test case
+     */
+    public AppTest( String testName )
+    {
+        super( testName );
+    }
+
+    /**
+     * @return the suite of tests being tested
+     */
+    public static Test suite()
+    {
+        return new TestSuite( AppTest.class );
+    }
+
+    /**
+     * Rigourous Test :-)
+     */
+    public void testApp()
+    {
+        assertTrue( true );
+    }
+}